About: Molecular Modelling Toolkit     Goto   Sponge   NotDistinct   Permalink

An Entity of Type : yago:Software106566077, within Data Space : dbpedia.demo.openlinksw.com associated with source document(s)
QRcode icon
http://dbpedia.demo.openlinksw.com/c/2pgwK2rhKC

The Molecular Modelling Toolkit (MMTK) is an open-source software package written in Python, which performs common tasks in molecular modelling. The Molecular Modeling Toolkit is a library that implements common molecular simulation techniques, with an emphasis on biomolecular simulations. It uses modern software engineering techniques (object-oriented design, a high-level language) in order to overcome limitations associated with the large monolithic simulation programs that are commonly used for biomolecules. Its principal advantages are (1) easy extension and combination with other libraries due to modular library design, (2) a single high-level general-purpose programming language (Python) is used for library implementation as well as for application scripts, (3) use of documented and

AttributesValues
rdf:type
rdfs:label
  • Molecular Modelling Toolkit (en)
  • MMTK (pl)
rdfs:comment
  • The Molecular Modelling Toolkit (MMTK) is an open-source software package written in Python, which performs common tasks in molecular modelling. The Molecular Modeling Toolkit is a library that implements common molecular simulation techniques, with an emphasis on biomolecular simulations. It uses modern software engineering techniques (object-oriented design, a high-level language) in order to overcome limitations associated with the large monolithic simulation programs that are commonly used for biomolecules. Its principal advantages are (1) easy extension and combination with other libraries due to modular library design, (2) a single high-level general-purpose programming language (Python) is used for library implementation as well as for application scripts, (3) use of documented and (en)
  • MMTK (ang. Molecular Modelling Toolkit) – zestaw narzędzi programowych do modelowania molekularnego. MMTK jest to oprogramowanie open source z wiodącym językiem Python, do wspomagania powszechnych działań w modelowaniu cząsteczek. Pakiet zawiera: (pl)
foaf:name
  • MMTK (en)
foaf:homepage
name
  • MMTK (en)
dcterms:subject
Wikipage page ID
Wikipage revision ID
Link from a Wikipage to another Wikipage
Link from a Wikipage to an external page
sameAs
dbp:wikiPageUsesTemplate
author
  • Konrad Hinsen (en)
genre
  • Bioinformatics (en)
latest release date
latest release version
operating system
programming language
  • Python, C (en)
released
website
has abstract
  • The Molecular Modelling Toolkit (MMTK) is an open-source software package written in Python, which performs common tasks in molecular modelling. The Molecular Modeling Toolkit is a library that implements common molecular simulation techniques, with an emphasis on biomolecular simulations. It uses modern software engineering techniques (object-oriented design, a high-level language) in order to overcome limitations associated with the large monolithic simulation programs that are commonly used for biomolecules. Its principal advantages are (1) easy extension and combination with other libraries due to modular library design, (2) a single high-level general-purpose programming language (Python) is used for library implementation as well as for application scripts, (3) use of documented and machine-independent formats for all data files, and (4) interfaces to other simulation and visualization programs. — Konrad Hinsen, The Molecular Modeling Toolkit: A New Approach to Molecular Simulations, As of 28 April 2011, MMTK consists of about 18,000 lines of Python code, 12,000 lines of hand-written C code, and some machine-generated C code. (en)
  • MMTK (ang. Molecular Modelling Toolkit) – zestaw narzędzi programowych do modelowania molekularnego. MMTK jest to oprogramowanie open source z wiodącym językiem Python, do wspomagania powszechnych działań w modelowaniu cząsteczek. Pakiet zawiera: * konstrukcje systemów cząsteczkowych szczególnie dla białek i polinukleotydów * Nieskończone systemy dla periodycznych warunków brzegowych * geometryczne operacje na współrzędnych * Wizualizacje przy użyciu zewnętrznych PDB i VRLM przeglądarek * animację dynamicznych trajektorii * AMBER 94 oddziaływania polowe z wieloopcyjnym wybieraniem elektrostatycznych interakcji * siłowe pola deformacyjne dla szybkich NM obliczeń dla polipeptydów * minimalizacje energii w wersjach: stopniowej i ciągłej * Molekularną dynamikę z wyborem ustaleń termostatycznych, barostatycznych i odległościowych * NM profil analizy * operacje torów * dopasowywanie ładunków punktowych * obliczanie powierzchni cząsteczek * IO sprzężenie do innych programów (pl)
gold:hypernym
prov:wasDerivedFrom
page length (characters) of wiki page
latest release date
latest release version
  • 2.7.4
release date
operating system
programming language
foaf:isPrimaryTopicOf
is Link from a Wikipage to another Wikipage of
is Wikipage redirect of
is foaf:primaryTopic of
Faceted Search & Find service v1.17_git147 as of Sep 06 2024


Alternative Linked Data Documents: ODE     Content Formats:   [cxml] [csv]     RDF   [text] [turtle] [ld+json] [rdf+json] [rdf+xml]     ODATA   [atom+xml] [odata+json]     Microdata   [microdata+json] [html]    About   
This material is Open Knowledge   W3C Semantic Web Technology [RDF Data] Valid XHTML + RDFa
OpenLink Virtuoso version 08.03.3332 as of Dec 5 2024, on Linux (x86_64-generic-linux-glibc212), Single-Server Edition (378 GB total memory, 64 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2025 OpenLink Software