About: Αr45 RNA

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αr45 is a family of bacterial small non-coding RNAs with representatives in a broad group of α-proteobacteria from the order Hyphomicrobiales. The first member of this family (Smr45C) was found in a Sinorhizobium meliloti 1021 locus located in the chromosome (C). Further homology and structure conservation analysis identified homologs in several nitrogen-fixing symbiotic rhizobia (i.e. S. medicae, S. fredii, Rhizobium leguminosarum bv.viciae, R. leguminosarum bv. trifolii, R. etli, and several Mesorhizobium species), in the plant pathogens belonging to Agrobacterium species (i.e. A. tumefaciens, A. vitis, A. radiobacter, and Agrobacterium H13) as well as in a broad spectrum of Brucella species (B. ovis, B. canis, B. abortus and B. microtis, and several biovars of B. melitensis), in Bartone

Attributes	Values
rdfs:label	Αr45 RNA (en)
rdfs:comment	αr45 is a family of bacterial small non-coding RNAs with representatives in a broad group of α-proteobacteria from the order Hyphomicrobiales. The first member of this family (Smr45C) was found in a Sinorhizobium meliloti 1021 locus located in the chromosome (C). Further homology and structure conservation analysis identified homologs in several nitrogen-fixing symbiotic rhizobia (i.e. S. medicae, S. fredii, Rhizobium leguminosarum bv.viciae, R. leguminosarum bv. trifolii, R. etli, and several Mesorhizobium species), in the plant pathogens belonging to Agrobacterium species (i.e. A. tumefaciens, A. vitis, A. radiobacter, and Agrobacterium H13) as well as in a broad spectrum of Brucella species (B. ovis, B. canis, B. abortus and B. microtis, and several biovars of B. melitensis), in Bartone (en)
foaf:depiction
dcterms:subject	RNA
Wikipage page ID	34678964 (xsd:integer)
Wikipage revision ID	1122882678 (xsd:integer)
Link from a Wikipage to another Wikipage	Beijerinckia indica Beijerinckiaceae BLAST Endosymbiont Nucleotide Mesorhizobium Methylocella Methylocella silvestris Bartonella Bartonella henselae Hyphomicrobiales Intergenic region Northern blot Gene expression Genome RegulonDB Maltose Sinorhizobium fredii Sinorhizobium medicae Sinorhizobium meliloti Position weight matrix Brucella Agrobacterium Transcription (biology) Locus (genetics) Synteny Agrobacterium tumefaciens Alphaproteobacteria Bartonella bacilliformis Bartonella clarridgeiae Bartonella grahamii Bartonella quintana Bartonella tribocorum Transcription factor Promoter (genetics) RNA RNA Bacterial growth Rhizobium Starkeya Starkeya novella Agrobacterium vitis Homology (biology) Azorhizobium caulinodans Brucella abortus Brucella canis Brucella melitensis Brucella microti Brucella ovis dbr:Ornithine Sequence motif Xanthobacter Xanthobacteraceae Non-coding RNA Secondary structure Fasta Sequence E value Nitrogen fixing
Link from a Wikipage to an external page	http://regpredict.lbl.gov/regpredict/help.html), http://www.sanger.ac.uk/Software/Rfam). http://meme.sdsc.edu/meme4_6_1/intro.html) http://gps-tools2.its.yale.edu/ar45_family.pfam http://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi)
sameAs	Αr45 RNA Αr45 RNA Αr45 RNA
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thumbnail	wiki-commons:Special:FilePath/C45_annotated_alignment_structure_conservation.png?width=300
has abstract	αr45 is a family of bacterial small non-coding RNAs with representatives in a broad group of α-proteobacteria from the order Hyphomicrobiales. The first member of this family (Smr45C) was found in a Sinorhizobium meliloti 1021 locus located in the chromosome (C). Further homology and structure conservation analysis identified homologs in several nitrogen-fixing symbiotic rhizobia (i.e. S. medicae, S. fredii, Rhizobium leguminosarum bv.viciae, R. leguminosarum bv. trifolii, R. etli, and several Mesorhizobium species), in the plant pathogens belonging to Agrobacterium species (i.e. A. tumefaciens, A. vitis, A. radiobacter, and Agrobacterium H13) as well as in a broad spectrum of Brucella species (B. ovis, B. canis, B. abortus and B. microtis, and several biovars of B. melitensis), in Bartonella species (i.e. B. henselae, B. clarridgeiae, B. tribocorum, B. quintana, B. bacilliformis, B. grahamii), in several members of the Xanthobactereacea family (i.e. Azorhizobium caulinodans, Starkey novella, Xhantobacter autotrophicus), and in some representatives of the Beijerinckiaceae family (i.e. Methylocella silvestris, Beijerinckia indica subsp. indica). αr45C RNA species are 147-153 nt long (Table 1) and share a well defined common secondary structure (Figure 1). All of the αr45 transcripts can be catalogued as trans-acting sRNAs expressed from well-defined promoter regions of independent transcription units within intergenic regions (IGRs) of the α-proteobacterial genomes (Figure 5). (en)
gold:hypernym	Family
prov:wasDerivedFrom	wikipedia-en:Αr45_RNA?oldid=1122882678&ns=0
page length (characters) of wiki page	70753 (xsd:nonNegativeInteger)
foaf:isPrimaryTopicOf	wikipedia-en:Αr45_RNA
is Link from a Wikipage to another Wikipage of	Small non-coding RNAs in the endosymbiotic diazotroph α-proteobacterium Sinorhizobium meliloti
is foaf:primaryTopic of	wikipedia-en:Αr45_RNA

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