A molecular phylogenetic study in 2020 showed that as then circumscribed Boronia was polyphyletic, and species were moved to other genera, mainly Cyanothamnus. The split was accepted in a 2021 classification of the family Rutaceae. The following list shows the species accepted by Plants of the World Online, as of September 2021. Unplaced names: * Boronia ovata Lindl. * Boronia tenuior Domin