About: Rfam

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Rfam is a database containing information about non-coding RNA (ncRNA) families and other structured RNA elements. It is an annotated, open access database originally developed at the Wellcome Trust Sanger Institute in collaboration with Janelia Farm, and currently hosted at the European Bioinformatics Institute. Rfam is designed to be similar to the Pfam database for annotating protein families.

Attributes	Values
rdf:type	Thing schema:CreativeWork work wikidata:Q386724 Database dul:InformationObject Biological database
rdfs:label	Rfam (en)
rdfs:comment	Rfam is a database containing information about non-coding RNA (ncRNA) families and other structured RNA elements. It is an annotated, open access database originally developed at the Wellcome Trust Sanger Institute in collaboration with Janelia Farm, and currently hosted at the European Bioinformatics Institute. Rfam is designed to be similar to the Pfam database for annotating protein families. (en)
foaf:depiction
dc:description	The Rfam database provides alignments, consensus secondary structures and covariance models for RNA families.
dcterms:subject	Public-domain software with source code Molecular biology Science and technology in Cambridgeshire Genetics databases RNA Wellcome Trust South Cambridgeshire District Genetic engineering in the United Kingdom
Wikipage page ID	9807237 (xsd:integer)
Wikipage revision ID	1119433735 (xsd:integer)
Link from a Wikipage to another Wikipage	BLAST Proteins Pfam Pseudogene Stochastic context-free grammar Stockholm format Public domain Public-domain software with source code Wikipedia Molecular biology Science and technology in Cambridgeshire Database Genetics databases European Bioinformatics Institute RNA Wellcome Trust EMBL South Cambridgeshire District Accession number (bioinformatics) Homology (biology) Genetic engineering in the United Kingdom Open access (publishing) Multiple sequence alignment Wellcome Trust Sanger Institute Primary sequence Hidden Markov models Non-coding RNA Janelia Farm Research Campus Annotated RNA structure dbr:Wikipedia:MCB
Link from a Wikipage to an external page	http://rfam.xfam.org http://ftp.ebi.ac.uk/pub/databases/Rfam/ http://eddylab.org/infernal http://mirbase.org
sameAs	Rfam Rfam Rfam Rfam Rfam Rfam
dbp:wikiPageUsesTemplate	dbt:Infobox_biodatabase dbt:Reflist dbt:Short_description dbt:URL dbt:Use_dmy_dates dbt:Wellcome_Trust
thumbnail	wiki-commons:Special:FilePath/Rfam_logo.png?width=300
description	The Rfam database provides alignments, consensus secondary structures and covariance models for RNA families. (en)
format	Stockholm format
license	Public domain
logo	120 (xsd:integer)
Organism	all (en)
scope	RNA families (en)
title	Rfam (en)
Center	European Bioinformatics Institute
has abstract	Rfam is a database containing information about non-coding RNA (ncRNA) families and other structured RNA elements. It is an annotated, open access database originally developed at the Wellcome Trust Sanger Institute in collaboration with Janelia Farm, and currently hosted at the European Bioinformatics Institute. Rfam is designed to be similar to the Pfam database for annotating protein families. Unlike proteins, ncRNAs often have similar secondary structure without sharing much similarity in the primary sequence. Rfam divides ncRNAs into families based on evolution from a common ancestor. Producing multiple sequence alignments (MSA) of these families can provide insight into their structure and function, similar to the case of protein families. These MSAs become more useful with the addition of secondary structure information. Rfam researchers also contribute to Wikipedia's RNA WikiProject. (en)
bookmark	yes (en)
download	http://ftp.ebi.ac.uk/pub/databases/Rfam/
pmid	33211869 (xsd:integer)
gold:hypernym	Database
prov:wasDerivedFrom	wikipedia-en:Rfam?oldid=1119433735&ns=0
page length (characters) of wiki page	14453 (xsd:nonNegativeInteger)
title	Rfam (en)
foaf:isPrimaryTopicOf	wikipedia-en:Rfam
is Link from a Wikipage to another Wikipage of	List of alignment visualization software List of biological databases Pfam Retroviral psi packaging element Riboswitch DIMPL Αr35 RNA RNA motif GOLLD RNA motif Epstein–Barr virus stable intronic-sequence RNAs Stockholm format

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