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The S1 domain is a protein domain that was originally identified in ribosomal protein S1 but is found in a large number of RNA-associated proteins. The structure of the S1 RNA-binding domain from the Escherichia coli polynucleotide phosphorylase has been determined using NMR methods and consists of a five-stranded antiparallel beta barrel. Conserved residues on one face of the barrel and adjacent loops form the putative RNA-binding site.

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rdf:type
rdfs:label
  • S1 domain (en)
rdfs:comment
  • The S1 domain is a protein domain that was originally identified in ribosomal protein S1 but is found in a large number of RNA-associated proteins. The structure of the S1 RNA-binding domain from the Escherichia coli polynucleotide phosphorylase has been determined using NMR methods and consists of a five-stranded antiparallel beta barrel. Conserved residues on one face of the barrel and adjacent loops form the putative RNA-binding site. (en)
name
  • S1 domain (en)
foaf:depiction
  • http://commons.wikimedia.org/wiki/Special:FilePath/PDB_1sn8_EBI.jpg
dct:subject
Wikipage page ID
Wikipage revision ID
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PROSITE
  • PDOC00053 (en)
SCOP
SMART
  • S1 (en)
caption
  • Crystal structure of the S1 domain of RNase E from E. coli . (en)
InterPro
  • IPR003029 (en)
Pfam
  • PF00575 (en)
Pfam clan
  • CL0021 (en)
symbol
  • S1 (en)
has abstract
  • The S1 domain is a protein domain that was originally identified in ribosomal protein S1 but is found in a large number of RNA-associated proteins. The structure of the S1 RNA-binding domain from the Escherichia coli polynucleotide phosphorylase has been determined using NMR methods and consists of a five-stranded antiparallel beta barrel. Conserved residues on one face of the barrel and adjacent loops form the putative RNA-binding site. The structure of the S1 domain is very similar to that of cold shock proteins. This suggests that they may both be derived from an ancient nucleic acid-binding protein. (en)
CDD
  • cd00164 (en)
MEROPS
  • S15 (en)
gold:hypernym
prov:wasDerivedFrom
page length (characters) of wiki page
Symbol
  • S1
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