About: CUT&RUN sequencing

Facets (new session)
Description
Metadata
Settings
- Rule:
- Inverse Functional Properties:
- "Same As":

About: CUT&RUN sequencing Goto Sponge NotDistinct Permalink

An Entity of Type : owl:Thing, within Data Space : dbpedia.demo.openlinksw.com associated with source document(s)
QRcode icon

http://dbpedia.demo.openlinksw.com/c/2Xmqj7YRNY

CUT&RUN sequencing, also known as cleavage under targets and release using nuclease, is a method used to analyze protein interactions with DNA. CUT&RUN sequencing combines antibody-targeted controlled cleavage by micrococcal nuclease with massively parallel DNA sequencing to identify the binding sites of DNA-associated proteins. It can be used to map global DNA binding sites precisely for any protein of interest. Currently, ChIP-Seq is the most common technique utilized to study protein–DNA relations, however, it suffers from a number of practical and economical limitations that CUT&RUN sequencing does not.

Attributes	Values
rdfs:label	CUT&RUN sequencing (en)
rdfs:comment	CUT&RUN sequencing, also known as cleavage under targets and release using nuclease, is a method used to analyze protein interactions with DNA. CUT&RUN sequencing combines antibody-targeted controlled cleavage by micrococcal nuclease with massively parallel DNA sequencing to identify the binding sites of DNA-associated proteins. It can be used to map global DNA binding sites precisely for any protein of interest. Currently, ChIP-Seq is the most common technique utilized to study protein–DNA relations, however, it suffers from a number of practical and economical limitations that CUT&RUN sequencing does not. (en)
dct:subject	DNA sequencing
Wikipage page ID	56731478 (xsd:integer)
Wikipage revision ID	1092819693 (xsd:integer)
Link from a Wikipage to another Wikipage	Protein A Epigenomics DNA DNA adenine methyltransferase identification DRIP-seq Nucleosome Peak calling ChiRP-Seq Gene expression Genome editing Genotype R-loop Leptin Competition-ChIP Microarray Micrococcal nuclease Transcription factors HITS-CLIP RIP-Chip DNA sequencing DNA sequencing EDTA Chromatin Binding sites Epigenetic Transcription factor Protein RNA ChIP-sequencing Hemoglobinopathies CUT&Tag sequencing RNA-binding protein ChIL-sequencing ChIP-exo ChIP-on-chip ChIP-Seq ChIP-seq In situ PAR-CLIP TCP-seq Systematic evolution of ligands by exponential enrichment Sono-Seq Polymerases CLIP-Seq Structural proteins dbr:ChIP-nexus dbr:Chromatin_endogenous_cleavage
Link from a Wikipage to an external page	https://dx.doi.org/10.17504/protocols.io.bdwni7de https://dx.doi.org/10.17504/protocols.io.ufeetje https://dx.doi.org/10.17504/protocols.io.umfeu3n https://dx.doi.org/10.17504/protocols.io.zcpf2vn
sameAs	CUT&RUN sequencing CUT&RUN sequencing
dbp:wikiPageUsesTemplate	dbt:Reflist dbt:Short_description
has abstract	CUT&RUN sequencing, also known as cleavage under targets and release using nuclease, is a method used to analyze protein interactions with DNA. CUT&RUN sequencing combines antibody-targeted controlled cleavage by micrococcal nuclease with massively parallel DNA sequencing to identify the binding sites of DNA-associated proteins. It can be used to map global DNA binding sites precisely for any protein of interest. Currently, ChIP-Seq is the most common technique utilized to study protein–DNA relations, however, it suffers from a number of practical and economical limitations that CUT&RUN sequencing does not. (en)
prov:wasDerivedFrom	wikipedia-en:CUT&RUN_sequencing?oldid=1092819693&ns=0
page length (characters) of wiki page	16052 (xsd:nonNegativeInteger)
foaf:isPrimaryTopicOf	wikipedia-en:CUT&RUN_sequencing
is Link from a Wikipage to another Wikipage of	MNase-seq Functional genomics Micrococcal nuclease Cut and run (disambiguation) CUT&Tag sequencing ChIL-sequencing ChIP-on-chip ChIP sequencing CUT&RUN CUT&RUN-seq CUT&RUN-sequencing CUT&RUN seq
is Wikipage redirect of	CUT&RUN CUT&RUN-seq CUT&RUN-sequencing CUT&RUN seq
is foaf:primaryTopic of	wikipedia-en:CUT&RUN_sequencing

Faceted Search & Find service v1.17_git147 as of Sep 06 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 08.03.3331 as of Sep 2 2024, on Linux (x86_64-generic-linux-glibc212), Single-Server Edition (378 GB total memory, 53 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software